FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751388

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751388
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17923733
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGAT22200.07.430939794
GATCGTA16901.172466E-76.135707494
CGGATCG16200.05.671267592-93
AGTCGGA33205.456968E-125.252817694
TCGGATC23458.216739E-85.22587794
Produced by FastQC (version 0.11.5)