FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16295995
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGATCG23850.010.26939394
GTCGGAT29950.08.11179692-93
TCGGATC34400.06.84607194
AAGTCGG47750.06.608931594
TAAGTCG17550.06.44115894
GATCGTA20750.05.569992592-93
AGTCGGA44700.05.163193794
Produced by FastQC (version 0.11.5)