FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18946362
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGATCG15201.2940291E-86.85929594
GTCGGAT21550.06.15759594
AAGTCGG35450.05.34741894
TAAGTCG16257.740688E-55.249519394
TCGGATC25257.0347596E-85.06760594
Produced by FastQC (version 0.11.5)