FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751489

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751489
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39590053
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG95450.05.400362594
GTCGGAG91950.05.351108694
AGTCGGA87100.05.16486894
Produced by FastQC (version 0.11.5)