FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18181098
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGTCG24900.07.726298394
GATCGTA27150.07.431655494
GTCGGAT41300.06.8169294
CGGATCG35500.06.74106994
TCGGATC42300.05.99018694
AGTCGGA56050.05.860158494
AAGTCGG59450.05.688828592-93
GGATCGT41050.05.37244194
CGTAGCC34001.2732926E-115.106340494
ATCGTAG31300.05.102426592-93
Produced by FastQC (version 0.11.5)