FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005751654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68116075
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGATCG65850.07.29886294
GTCGGAT96100.06.031044594
GATCGTA64850.05.95819494
TCGGATC103250.05.293936394
AAGTCGG140800.05.12034994
TAAGTCG61300.05.073343394
Produced by FastQC (version 0.11.5)