FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005751663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155766782
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCCG41650.017.22509828-29
ATCCGAC62350.09.7731130-31
GAACGAC93150.09.56126714-15
GGCTACG98100.08.95942222-23
TACGATC86700.08.90376426-27
GCTACGA96900.08.11457324-25
GATCCGA77800.07.891103328-29
TCCGACT94050.07.22950530-31
CTACGAT116050.06.998026424-25
CGACATG144100.06.90871216-17
CCGACTT110550.06.363734732-33
ACGACAT155950.06.29362416-17
AACGACA183450.05.647019414-15
GGAACGA176850.05.53605512-13
CGACTTT142550.05.200163432-33
GTCGGAG292600.05.0282494
Produced by FastQC (version 0.11.5)