FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005751681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139631090
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCCG33000.015.71724728-29
GAACGAC78800.08.95063214-15
ATCCGAC54050.08.90010530-31
GATCCGA67800.07.511526628-29
TACGATC78350.07.419245726-27
GGCTACG88300.07.37203822-23
GCTACGA81950.07.18212824-25
CTACGAT97700.06.24118824-25
CGACATG127750.06.14032516-17
TCCGACT85950.05.89718630-31
ACGACAT138150.05.507565516-17
GGAACGA142700.05.437838612-13
CCGACTT103500.05.019412532-33
Produced by FastQC (version 0.11.5)