FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751809

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751809
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64244663
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTGTTG15228950.068.84941
GTGTTGG16153500.064.6807562
TGTTGGG16391950.062.2690283
GTTGGGT17355900.058.4886674
TGGGTGT19269750.053.0257236
TTGGGTG19484700.052.879865
GGGTGTG20489200.049.612267
GGTGTGT22951450.044.0415238
GTGTGTT24166900.041.3285689
GTTGCGT73100.028.880964
TGTTGCG89450.024.0849063
TTGCGTG90350.023.951895
TGTGTTT22982150.021.5150510-11
GTGTTTG26520800.020.62919210-11
TGTTTGG26993700.018.21619612-13
GTTTGGT17449200.017.65623912-13
GAACGAC132350.017.08292894
GTTTGGG14102300.015.86545912-13
TGCGTGT144850.015.6865746
GCGTGTG150750.015.6286447
Produced by FastQC (version 0.11.5)