FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57118755
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTGTTG13995800.071.524971
GTGTTGG14785350.067.3418052
TGTTGGG15258050.064.1258853
GTTGGGT16237500.059.9638184
TGGGTGT17855550.054.7328156
TTGGGTG18125250.054.3600585
GGGTGTG19223250.050.6131947
GGTGTGT21279600.045.5626038
GTGTGTT22297000.043.3755539
GTTGCGT76450.036.9498024
TGTTGCG90500.031.4719453
TTGCGTG92800.030.7571745
TGTGTTT21356100.022.53496410-11
GTGTTTG23971750.021.96941410-11
TGCGTGT147550.020.3720936
TGTTTGG24184500.019.78252812-13
GTTTGGT15439500.019.55211412-13
GCGTGTG155850.019.2849547
CGTGTGT162400.018.1834348
GTTTGGG12149250.017.34942412-13
Produced by FastQC (version 0.11.5)