FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005752005

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752005
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16565661
Sequences flagged as poor quality0
Sequence length100
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTGTTG1587400.053.2488671
GTGTTGG1624900.052.037912
TGTTGGG1631000.051.218873
GTTGGGT1628100.051.0518884
TGGGTGT1794350.046.2689976
TTGGGTG1822900.045.721545
GGGTGTG1899750.043.5869567
GGTGTGT2156050.038.3490228
GTGTGTT2304150.035.8950929
GTGTTTG2088550.021.19649910-11
GTTTGGT1193450.019.56949612-13
TGTTTGG2055450.019.33898412-13
GTTTGGG1116850.018.4731112-13
TGTGTTT2182100.018.45437610-11
TTGGGGG573700.016.17729214-15
TTGGTTT848000.014.21342114-15
TTTGGGG847150.013.85363514-15
TTTGGTT1035750.013.66294614-15
TCGATCG2651.8499122E-913.30476982-83
CGATCGC2501.1677912E-813.16285182-83
Produced by FastQC (version 0.11.5)