FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005752187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51953713
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATATATATATATATATATATATATATATATATATATATATATATA3512190.6760229052348963No Hit
ATATATATATATATATATATATATATATATATATATATATATATATATAT2450090.4715909332601503No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATTAATTAAGGCAACTCCT1122240.21600766051119388No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)