FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005752196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45443173
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATATATATATATATATATATATATATATATATATATATATATATA2831490.6230836918011865No Hit
ATATATATATATATATATATATATATATATATATATATATATATATATAT2326030.511854662965546No Hit
AAGTCGGATCGTAGCCATGTCGTTCTGTGAGCCAAGGAGTTGACCAGGAA668030.14700337936349647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)