FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005752209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57083032
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTGTTG8295350.055.118741
GTGTTGG8625350.052.8180542
TGTTGGG8778950.051.2213673
GTTGGGT9162050.048.874044
TGGGTGT9942650.045.41876
TTGGGTG10239450.044.7449265
GGGTGTG10509550.042.6718987
GGTGTGT12129150.036.787418
GTGTGTT13400650.033.136519
TTGGTTT7266650.025.8715553
TGGTTTT6420400.025.1488844
TTTGGTT8882300.023.664982
GGTTTTT6491600.021.0466465
GTTTGGT11130250.020.9683721
TGTGTTT13170750.016.84266910-11
GTGTTTG15312100.016.2568841
TGTTTGG15318850.015.8662872
GAACGAC72050.014.73154394
GTTTTTT8590000.014.1268716
TGGTTTG1888850.013.9875174
Produced by FastQC (version 0.11.5)