FastQCFastQC Report
Thu 12 May 2022
EGAF00005752586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36696198
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATATATATATATATATATATATATATATATATATATATATATATA618500.16854607117609297No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCT595480.1622729417363619No Hit
ATATATATATATATATATATATATATATATATATATATATATATATATAT444820.12121691734931232No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)