FastQCFastQC Report
Thu 12 May 2022
EGAF00005752599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30593208
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTCGGATCGTAGCCATGTCGTTCTGTGAGCCAAGGAGTTGAGTTGCCA811220.2651634310465251No Hit
TATATATATATATATATATATATATATATATATATATATATATATATATA404600.13225157688595454No Hit
ATATATATATATATATATATATATATATATATATATATATATATATATAT404210.13212409761016236No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)