FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005752831

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752831
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56323133
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTGTTG9961650.053.957141
GTGTTGG10359550.051.658832
TGTTGGG10660650.049.596733
GTTGGGT11166600.047.185524
TGGGTGT12453550.043.1275836
TTGGGTG12753100.042.6790925
GGGTGTG13063300.040.927357
GGTGTGT15167000.035.0770038
GTGTGTT16752200.031.7076329
TGGTTTT8318250.024.7773484
TTTGGTT11729000.023.3513282
TTGGTTT11385750.021.4191673
GGTTTTT8323000.020.9158135
GTTTGGT14842450.020.888761
GTGTTTG19481850.017.063781
GTGTCGG47700.016.9543742
GTTGCGT47500.016.6208424
TGTTTGG19638400.016.519012
TGTGTTT16458650.016.1505210-11
TGTCGGG49700.015.7916023
Produced by FastQC (version 0.11.5)