EGAF00005752870 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005752870
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15227699
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGAGCCAAGCGGTCTTAGGAAGACAACCTTCCTGGTCAACTCCTTGGCT	55215	0.36259581963105525	No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACATGTTTCCCCAACTCCTT	44282	0.2907990235425589	No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAATTGATAGATTCAACTCCTTGGCT	38398	0.2521589112051663	No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAATTGATAGATTCAACTCCTTGGCT	34543	0.2268432019834382	No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAACCTTCCTGGTCAACTCCTTGGCT	32719	0.21486502983806025	No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAACCTTCCTGGTCAACTCCTTGGCT	23782	0.1561759265139139	No Hit
AGTCGGAGGCCAAGCGCTCTTAGGAAGACAACATGTTTCCCCAACTCCTT	16387	0.10761310687845879	No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAATTGATAGATTCAACTCCTTGGCT	15366	0.10090821994839798	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTGTTGG	124820	82.6379	1
TGTTGCG	33915	79.909424	3
TCGGACG	940	78.63951	3
CGGACGC	1010	75.60493	4
GGCAAGC	26070	73.31984	5
GTTGCGT	38870	72.05673	4
GCGTGTC	4405	70.24137	7
GTGAGGC	19985	68.861206	1
TCTTGGG	31330	67.61209	2
CTTGCGT	3835	66.4583	1
GCAAGCG	31125	65.602776	6
GAGGCAA	25100	65.598045	3
GAGCCAA	31970	65.59588	3
GTGTTGC	43165	65.098175	2
GGGCCAA	14930	65.05916	3
GTTCGGT	4695	64.99786	2
AGGCAAG	25190	64.44533	4
GTCTTGG	24885	64.01607	1
GGCTGTG	104095	62.436684	6
GAGTTGG	19665	62.07271	2