FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005752873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1091630
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAGCCAAGGAGTTGTAGCTAAGTGTTGTCTTCCTAAGACCGCTTGGCC27570.25255810118813155No Hit
GTGAGCCAAGGAGTTGGGTCTAGTCATTGTCTTCCTAAGACCGCTTGGCC20950.19191484294128963No Hit
GTGAGCCAAGGAGTTGTACAAAAGGATTGTCTTCCTAAGACCGCTTGGCC16860.15444793565585407No Hit
GTGAGCCAAGGAGTTGTAGCTAAGTGTTGTCTTCCTAAGACCGCTTGCCT16480.15096690270512902No Hit
GTGAGCCAAGGAGTTGTAGCTAAGTGTTGTCTTCCTAAGACCGCTTGGCT14010.12834018852541612No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)