EGAF00005752876 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005752876
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4601701
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTT	27116	0.5892603626354689	No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT	13423	0.29169648353945643	No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT	12334	0.26803132146134656	No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT	11746	0.25525343780484655	No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT	11473	0.24932084896432863	No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT	10098	0.2194405938152001	No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT	7923	0.17217546294294217	No Hit
GTGAGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC	5681	0.12345434872887222	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGTTGCG	29555	89.3443	3
CGGACGC	1225	88.44197	4
TCGGACG	1180	88.24903	3
GTTGCGT	32045	85.213745	4
GTGTTGC	32655	83.788216	2
TTGCGTG	33340	81.890724	5
GCGTGTC	2870	81.36517	7
AGTTGCG	1280	81.354576	3
TGCGTGT	35095	80.15192	6
GGACGCC	1310	79.41331	5
GTCGGAC	980	78.903786	2
GACGCCA	1395	78.28208	6
CGCCAAG	1335	78.14811	8
ACGCCAA	1375	78.06761	7
GCGTGTG	34375	75.465355	7
GTTGCCT	9215	74.01843	4
CGTGTCT	3190	73.21709	8
ACTCGGA	1315	73.023476	1
CGTGTGT	35565	72.91311	8
GATGCGT	1105	72.042885	4