EGAF00005752888 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005752888
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7091321
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTT	54657	0.7707590729569286	No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTTGGCT	24521	0.34578888757115916	No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAATTAATTAAGGCAACTCCTTGGCT	16969	0.23929250981587208	No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCTTGGCT	16900	0.23831948941530076	No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTTGGCT	14937	0.21063776410629276	No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCTTGGCT	12832	0.18095359101639877	No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTTGGCT	12022	0.16953117761838732	No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAATTAATTAAGGCAACTCCTTGGCT	9803	0.13823940560581024	No Hit
AGTCGGAGGCCAAGCGCTCTTAGGAAGACAATGTCATAAATCAACTCCTT	7799	0.10997950875443377	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGTTGCG	45810	90.13513	3
GTTGCGT	49095	87.03517	4
CGGACGC	1905	86.80343	4
TCGGACG	1860	86.142426	3
GTGTTGC	50295	84.61788	2
AGTTGCG	1930	83.7506	3
TTGCGTG	51645	82.84318	5
TGCGTGT	54420	81.250404	6
GCGTGTC	4485	80.29889	7
GCGTGTG	51795	78.78465	7
ACTCGGA	2070	77.7786	1
GATGCGT	1745	77.48386	4
CGTGTGT	53140	76.693474	8
GGACGCC	2105	76.26389	5
GACGCCA	2305	75.35901	6
GTTGCCT	15165	74.433624	4
TGATGCG	1615	72.65708	3
TGTGTTG	282935	72.03863	1
GTCGGAC	1880	71.98064	2
TCTGTTG	31745	71.21168	1