FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005752893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5607274
Sequences flagged as poor quality0
Sequence length100
%GC42

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCC126860.22624184229270766No Hit
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCT82130.14647045962084249No Hit
GTGAGCCAAGGAGTTGCCTTAATTAATTGTCTTCCTAAGACCGCTTGGCC70910.12646073653614928No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGGCC63850.11386994821369527No Hit
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGCCT60940.1086802606756866No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)