FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005752910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3016485
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT676392.242311829828426No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT660132.1884080312018788No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT616962.0452944403834263No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT599851.988572792505184No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTT448411.4865315093560882No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT436331.4464848988143484No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT299160.9917503319260662No Hit
GTGAGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC286560.9499798606656423No Hit
GTGAGCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCTC186000.6166117186062586No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGACTAGACCCAACTCCTT164200.5443421730921917No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTT130740.4334183660783992No Hit
AGTCGGAGGCCAAGCGCTCTTAGGAAGACAATCCTTTTGTACAACTCCTT122890.40739469945980167No Hit
GTGGGGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT113890.3775586485594989No Hit
GTGGGGCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT102000.3381419102034321No Hit
CTGAGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT98030.32498089663963187No Hit
CTGAGGCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT97290.32252771023227367No Hit
ATGAGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT95730.31735612807622116No Hit
CTGAGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT95070.31516815101019896No Hit
CTGAGGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT84600.2804588784628467No Hit
ATGAGGCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT75520.2503576182212078No Hit
CTGGGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT75180.24923047852052968No Hit
ATGAGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT73300.2429980589991331No Hit
AGACGGAGGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTT69230.2295055337586628No Hit
GTGAGGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGC67560.22396928875827327No Hit
GTGAGCCAACGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC63020.20891865863745385No Hit
GTGAGGCAACGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCTC58870.19516092405564756No Hit
GTGAGCCAACGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCTC57590.19091757459427114No Hit
GTGAGGCAACGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC57240.18975728372592604No Hit
GTGAGGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGC56060.18584544594121968No Hit
CTGGGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT55850.1851492714202126No Hit
CTGAGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC54360.18020974743782914No Hit
GTGAGCCAAGCGCTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT51490.17069536231739924No Hit
ATGAGGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT45640.15130192923220237No Hit
ATGGGCCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT43470.1441081258484627No Hit
GTGAGCCAAGCGCTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT41860.13877078785407518No Hit
AGTCGGAGGCCAAGCGCTCTTAGGAAGACAATGACTAGACCCAACTCCTT40250.1334334498596877No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGGTAGAGAGTCAACTCCTT40040.1327372753386806No Hit
GTGGGCCAACGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC39730.1317095891410035No Hit
CTGAGCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCTC38290.12693582099695505No Hit
GCGAGCCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT37910.12567607662560895No Hit
AGTCGGAGGCCAAGCGCTCTTAGGAAGACAACACTTAGCTACAACTCCTT35080.11629429617584705No Hit
GTGAGCCAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC34750.11520030764283595No Hit
TCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCTCACAAGTCGGAGG34740.11516715647516894No Hit
AGACGGAGGCCAAGCGGTCTTAGGAAGACAATGACTAGACCCAACTCCTT33040.10953145797177842No Hit
GTGAGGCAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC32710.10843746943876731No Hit
GTGACGCAAGCGGTCTTAGGAAGACAACACTTAGCTACAACTCCTTGGCT32310.10711142273208717No Hit
GCGAGGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCT31330.10386260830072087No Hit
GTGGGCAAGCGGTCTTAGGAAGACAATCCTTTTGTACAACTCCTTGGCTC30970.10266916626470875No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)