FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005752918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13065165
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAGCCAAGCGGTCTTAGGAAGACAACCTTCCTGGTCAACTCCTTGGCT353930.27089592821828123No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAATTGATAGATTCAACTCCTTGGCT283040.21663714158986894No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACATGTTTCCCCAACTCCTT277950.21274128570132866No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAATTGATAGATTCAACTCCTTGGCT268580.20556954313244416No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAACCTTCCTGGTCAACTCCTTGGCT226910.17367557164413921No Hit
GTGTGTTGGGTGTGTTGGGTGTGTTGGGTGTGTTGGGTGTGTTGGGTGTG209380.16025821334824322No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAACCTTCCTGGTCAACTCCTTGGCT162710.12453727143897533No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)