EGAF00005752931 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005752931
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1241798
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCC	4977	0.40078982249931144	No Hit
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCT	2723	0.2192788199046866	No Hit
GTGAGCCAAGGAGTTGTCAGTGAGTCTTGTCTTCCTAAGACCGCTTGGCC	2585	0.2081659013784851	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGGCC	2275	0.18320209889209035	No Hit
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGCCT	2183	0.17579348654128935	No Hit
GTGAGCCAAGGAGTTGCCTTAATTAATTGTCTTCCTAAGACCGCTTGGCC	1702	0.1370593284898188	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGGCT	1645	0.13246920996812686	No Hit
GTGAGACAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCC	1468	0.11821568403234664	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGCCT	1433	0.11539719020323756	No Hit
GTGAGCCAAGGAGTTGCCTTAATTAATTGTCTTCCTAAGACCGCTTGGCT	1329	0.10702223711102773	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACCGAC	530	88.998955	2
ACCGACC	570	88.37618	3
GTAGGGT	4570	84.75116	3
TAGGGTG	5810	84.11563	4
AAACCGA	950	81.6404	1
AGGGTGT	5900	81.60133	5
TGTAGGG	4050	80.47922	2
ACCGATC	350	80.110275	3
AACCGAT	295	78.34925	2
AACGAGT	960	77.73589	8
GTGTAGG	3965	77.531715	1
CCGACCC	615	75.681274	4
ACAAGGA	4035	75.60659	6
GACAAGG	3195	75.56709	5
CAACGAG	1010	74.455826	7
ACGAGTT	1065	74.258095	9
GCCAACG	830	73.294556	5
AGACAAG	3690	69.889336	4
CGACCCC	580	69.65154	5
GAGACAA	3605	68.68101	3