FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005752932

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005752932
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2833572
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGACTCACTGACAACTCCTT69470.24516758353061086No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTTGGCT66700.23539193639688705No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTTGGCT59150.20874712200713444No Hit
AGACGGAGGCCAAGCGGTCTTAGGAAGACAAGACTCACTGACAACTCCTT55000.1941012968789923No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCTTGGCT54250.1914544610124606No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCTTGGCT52010.18354924455775254No Hit
GTGAGCCAAGCGGTCTTAGGAAGACAATTAATTAAGGCAACTCCTTGGCT44980.15873956970212863No Hit
GTGGGCCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTTGGCT44810.1581396202390481No Hit
GAGAGCCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTTGGCT41570.1467052892956311No Hit
GTGAGGCAAGCGGTCTTAGGAAGACAATTAATTAAGGCAACTCCTTGGCT36850.13004786890892484No Hit
GAGAGCCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCTTGGCT34000.11998989261610432No Hit
GAGAGGCAAGCGGTCTTAGGAAGACAATGTCATAAATCAACTCCTTGGCT31760.11208467616139628No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)