EGAF00005752933 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005752933
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2833572
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCC	14852	0.5241440838630534	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGGCC	6848	0.24167376018678896	No Hit
GTGAGCCAAGGAGTTGTCAGTGAGTCTTGTCTTCCTAAGACCGCTTGGCC	5619	0.19830094312055596	No Hit
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCT	5604	0.19777157594724962	No Hit
GTGAGCCAAGGAGTTGCCTTAATTAATTGTCTTCCTAAGACCGCTTGGCC	5454	0.1924779042141862	No Hit
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGCCT	4902	0.1729971922365128	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGGCT	3327	0.1174136390393468	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGCCT	3182	0.11229642303071882	No Hit
GTAAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCC	3114	0.10989662517839674	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGAGT	3230	86.53997	8
GCCAACG	2955	84.954926	5
ACGAGTT	3515	84.441315	9
TATTGGG	11080	83.63622	2
ATTGGGT	12285	83.525604	3
CAACGAG	3340	83.519196	7
GTATTGG	10580	83.50651	1
ACCGACC	1045	82.81299	3
GTAAGCC	4515	80.7522	1
AACCGAC	995	79.2736	2
CCAACGA	3655	78.42201	6
AAACCGA	1820	75.99523	1
ACCGATC	615	74.22316	3
TAAGCCA	6060	73.57573	2
GGATGTG	10015	73.09186	1
CCGACCC	1180	70.469795	4
GATGTGT	11275	69.24549	2
AGCCAAC	4145	69.240364	4
CGACCCC	1035	68.90695	5
CCATCGA	540	67.0114	6