EGAF00005752935 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005752935
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1630102
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCC	9883	0.6062810793435012	No Hit
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGGCT	5411	0.33194241832719673	No Hit
GTGAGCCAAGGAGTTGTCAGTGAGTCTTGTCTTCCTAAGACCGCTTGGCC	4732	0.2902885831684152	No Hit
GTGAGCCAAGGAGTTGATTTATGACATTGTCTTCCTAAGACCGCTTGCCT	4168	0.2556895212692212	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGGCC	4139	0.25391049149071654	No Hit
GTGAGCCAAGGAGTTGCCTTAATTAATTGTCTTCCTAAGACCGCTTGGCC	3638	0.2231762184206878	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGGCT	3484	0.21372895683828375	No Hit
GTGAGCCAAGGAGTTGACTGCCTTATTTGTCTTCCTAAGACCGCTTGCCT	2938	0.18023412031885122	No Hit
GTGAGCCAAGGAGTTGCCTTAATTAATTGTCTTCCTAAGACCGCTTGGCT	2607	0.15992864250212563	No Hit
GTGAGCCAAGGAGTTGCCTTAATTAATTGTCTTCCTAAGACCGCTTGCCT	1939	0.1189496117420873	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGATC	685	90.26923	3
ACCGACC	1110	87.84516	3
AACCGAC	1015	87.42062	2
AAACCGA	1775	86.07174	1
AACCGAT	635	83.98984	2
CGACCCC	995	83.18669	5
CCGACCC	1155	81.08502	4
GCCAACG	1115	77.64691	5
AACGAGT	1240	77.118095	8
ACGAGTT	1430	75.20917	9
CAACGAG	1305	74.10102	7
CCAACGA	1485	71.225105	6
TAGGGTG	2830	68.36981	4
CAACGAC	230	68.34783	7
GCCAAGC	2160	66.729294	5
GACCCCC	1335	66.38016	6
GTGAGCG	830	66.26487	1
GTAGGGT	2200	65.293686	3
CGAAGGA	710	65.09085	6
TGAGCGA	765	64.78134	2