FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753232
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences190477163
Sequences flagged as poor quality0
Sequence length90
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC245550.011.4278761
CCGCGCC312850.08.856032
CGCGCCC238800.08.1567073
AACGCGA91300.07.22366951
ACGCGAG91850.07.2211982
ACCGTGC323500.07.12897441
CGCGAGT94350.06.85188443
ACTGCGC282300.06.7111151
CGCGCCT162700.05.57310723
CGCCCGG384750.05.55357655
CCTTCGT414050.05.43802261
CCGTGCC379050.05.41556362
GCGCCCG320550.05.25148874
ACCGCAC258300.05.12289141
CGTGCCC306950.05.10120063
Produced by FastQC (version 0.11.5)