FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753233
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences183840752
Sequences flagged as poor quality0
Sequence length90
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC93850.011.3825761
CCGATCT111050.09.4974872
ACCGCGC224650.08.8551481
CCGCGCC279500.07.126072
CGCGCCC223450.06.822573
ACGCGAG93350.05.4465892
CGCGAGT93150.05.3201133
ACCGTGC288100.05.25533441
AACGCGA94350.05.21536971
CGATCTA72700.05.1413523
Produced by FastQC (version 0.11.5)