FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753235
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences182605526
Sequences flagged as poor quality0
Sequence length90
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC224250.012.3136261
TCCGATC88050.010.7249621
CCGCGCC282300.09.5662012
CCGATCT106200.08.8723542
CGCGCCC225450.08.3961263
AACGCGA90150.08.0901671
ACGCGAG91050.07.94628052
CGCGAGT91450.07.1755893
ACCGTGC291550.07.0564121
ACTGCGC263350.06.8355221
GACGCGA37700.06.4858031
CGCGCCT136450.06.13474043
CGATCTA67700.05.5920433
ACCGCAC244800.05.56247661
CGCCCGG358050.05.5005855
CGCGATC164300.05.47889383
CCGTGCC336450.05.47606952
GCGCCCG290450.05.42925264
GCGCGAT166450.05.15539262
CCTTCGT392600.05.03616141
Produced by FastQC (version 0.11.5)