FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753239
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences176814600
Sequences flagged as poor quality0
Sequence length90
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC94250.08.9156611
ACCGCGC246850.07.8975021
CCGATCT119500.07.16505342
CCGCGCC345650.05.80428172
ACGCGAG128900.05.40520672
CGCGCCC274200.05.31147053
AACGCGA127650.05.2991961
Produced by FastQC (version 0.11.5)