FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753241
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences188204835
Sequences flagged as poor quality0
Sequence length90
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC90400.010.8164011
CCGATCT106350.09.3321352
ACCGCGC217550.09.0279681
CCGCGCC265950.07.3687272
CGCGCCC208950.06.9234743
AACGCGA103400.06.1956411
ACGCGAG103550.06.0106042
CGCGAGT105450.05.54340033
Produced by FastQC (version 0.11.5)