FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753243
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences195410680
Sequences flagged as poor quality0
Sequence length90
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC95750.011.0229311
CCGATCT112100.09.707682
ACCGCGC232400.08.0878581
AACGCGA102650.06.6771451
CCGCGCC285950.06.58277752
ACGCGAG102850.06.454672
CGCGAGT100550.06.26569033
CGCGCCC217650.06.04011773
ACTGCGC270500.05.06771851
Produced by FastQC (version 0.11.5)