FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53144919
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGCGTA11900.00289539626.701704145
CTCGTAT141050.06.168047145
CGTCTGA571900.06.1610637145
TCTCGTA152750.06.1227703145
ACGTCTG634700.05.9855256145
TATGCCG120250.05.8482533145
ACACGTC644950.05.631851145
ACCGCGC131850.05.6238541
ATCGGAA956300.05.587439145
AGATCGG996700.05.535537145
CACGTCT682950.05.3928145
CGTATGC144700.05.3611107145
ATCGCGT22254.893063E-45.213501145
TAGATCG382750.05.1332636145
GCACACG794350.05.083734145
Produced by FastQC (version 0.11.5)