FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52208319
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG54200.014.183609145
AGCGTCG463000.06.500508145
CGTCGTG412650.06.4676447145
GAGCGTC527400.06.1192765145
GTCGTGT419450.05.671185145
AGATCGG738800.05.634628145
GCGTCGT422650.05.54699140-144
CGTGTAG413000.05.39099145
ATCGGAA699900.05.3467994145
TCGTGTA401700.05.2718277145
GATCGGA703500.05.267894145
AGAGCGT577850.05.196288140-144
AAGAGCG664300.05.021966145
Produced by FastQC (version 0.11.5)