FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62915560
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTACGC180750.07.8424697145
GTACGCA199800.07.2038765145
ACGTACG193800.07.2018485145
ACACGTC624050.06.5116186145
TACGCAA215800.06.1981626145
TCACGTA319750.06.115589145
CGTCTGA556900.06.1089306145
GATCGGA963400.05.862879145
GTCACGT314250.05.852505145
AGTCACG323300.05.778618145
CACGTAC278400.05.7705817145
CGGAAGA936750.05.7037463145
AGATCGG1007500.05.692834145
ATCGGAA952550.05.67019145
TCGGAAG938350.05.523587145
CACGTCT662850.05.4943843145
ACGTCTG614650.05.4758263145
TCTCGTA149150.05.409988145
GCACACG785100.05.2592025145
TAGATCG369600.05.231741145
Produced by FastQC (version 0.11.5)