FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61778535
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTACG199100.07.6625366145
CGTACGC185250.07.490308145
AGTCACG334650.06.9250727145
GTACGCA206650.06.74979145
CGTCTGA539700.06.43428145
CACGTAC280400.06.4253697145
ACACGTC606200.06.1718564145
AGATCGG981100.05.9904537145
GATCGGA940400.05.902082145
GTCACGT320950.05.839919145
TACGCAA224900.05.7175283145
GCACACG769200.05.572335145
TCGGAAG915900.05.5681834145
ACGTCTG603300.05.539225145
ATCGGAA929550.05.494233145
CGCAAAT217350.05.481617145
CACGTCT651050.05.4342437145
CACACGT766150.05.43332145
TCACGTA318600.05.3813434145
CGGAAGA912950.05.307663145
Produced by FastQC (version 0.11.5)