FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63019255
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTACGC181950.08.582251145
ACGTACG196700.08.234085145
GTACGCA202650.06.9171233145
CGTCTGA551550.06.7290044145
CGCGTAT16403.0802668E-46.2001047145
ACACGTC621650.06.1805134145
AGATCGG997250.05.9939156145
CACGTAC278950.05.9103656145
TACGCAA224000.05.9011707145
GATCGGA957250.05.811901145
ACGTCTG614200.05.806126145
CGTATGC140300.05.7461915145
AGTCACG333100.05.734505145
ATCGGAA947350.05.6809707145
CACGTCT665100.05.6675487145
GTCACGT321500.05.6025476145
CGGAAGA927400.05.568232145
TCGGAAG934000.05.4355702145
TCACGTA323150.05.4166117145
GCACACG793000.05.3762536145
Produced by FastQC (version 0.11.5)