FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005753352

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753352
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46377181
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG43300.011.55205145
AGCGTCG493550.06.771231145
CGTCGTG443950.06.499005145
TCGTGTA430800.06.31035145
GCGTCGT454900.05.976073140-144
GTCGTGT449450.05.854949145
TCGGAAG747000.05.822755145
CGTGTAG433650.05.717216145
GAGCGTC554500.05.6608834145
CGCCGTA89400.05.5951204145
AGATCGG800650.05.550289145
GATCGGA766600.05.475296145
ATCGGAA758950.05.454071145
AAGAGCG686750.05.4363375145
CGGAAGA745550.05.318736145
AGAGCGT605050.05.211897145
Produced by FastQC (version 0.11.5)