FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005753359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45999376
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGAATC170350.06.6932325145
ATCGGAA694150.06.4342837145
AGATCGG740650.06.2166247145
AGTCACG233250.06.1959777145
CGTCTGA396200.06.140571145
TCACGAA228300.06.044023145
GCACACG572300.05.989584145
ACGTCTG440500.05.935195145
GTCACGA201400.05.841629145
CGGAAGA683650.05.8107467145
ACACGTC446400.05.8079443145
TCGGAAG685200.05.702212145
GATCGGA706550.05.6635284145
CACGTCT479650.05.632445145
CACACGT566700.05.6130557145
TAGATCG273350.05.5261507145
TCTCGTA105650.05.4991927145
TCGTATG111250.05.4834976145
CGAATCT172250.05.4810348145
TATGCCG83400.05.3118057145
Produced by FastQC (version 0.11.5)