FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72536683
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG73050.016.187449145
CGCCGTA230200.06.365859145
GTCGCCG288600.06.1083083145
AGCGTCG1314850.05.8981047145
CGTGTAG1127600.05.873902145
CGTCGTG1193550.05.847166145
TGGTCGC342300.05.8282313145
GTGGTCG370150.05.7033145
GGTCGCC328550.05.4980516145
TCGTGTA1136600.05.46996145
GCGTCGT1232850.05.4312835145
TCTCGGT501350.05.426268145
GCCGTAT258150.05.395604145
CTCGGTG519200.05.365467145
GTCGTGT1184200.05.3113513145
TCGCCGT258450.05.2507358140-144
GAGCGTC1422650.05.2064137145
TCGGTGG478500.05.185076145
AGATCGG1988450.05.1332264145
GTAGATC880050.05.069659145
Produced by FastQC (version 0.11.5)