FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72822703
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTCGT331250.06.3246965145
CGTCTGA1095550.06.286213145
CGTATGC260000.06.1619287145
ACGTCTG1192450.06.134069145
TATGCCG223950.06.085615145
TCTCGTA274800.06.0674863145
ACACGTC1233000.05.808869145
TCGTATG277950.05.7379093145
CACGTCT1267100.05.669705145
CGGAAGA1786100.05.422485145
GATCGGA1892100.05.363912145
TAGATCG734600.05.3585415145
TGCCGTC253000.05.3295455145
CACACGT1439250.05.3290176145
TCGGAAG1814600.05.3053603145
AGATCGG1949800.05.2944107145
TCGCGTA19300.00250399165.2585793145
ATCGGAA1857950.05.2401013145
GCACACG1460200.05.1880198145
CTCGTAT258400.05.0778956145
Produced by FastQC (version 0.11.5)