FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62443809
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG63450.016.221504145
GAGCGTC1366350.05.7876579
AGAGCGT1451750.05.46209438
AGAGCGG182000.05.4162903145
AAGAGCG1576850.05.0885147
Produced by FastQC (version 0.11.5)