FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753394

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753394
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51953401
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG45900.07.578888145
AGCGTCG307000.06.704353145
GAGCGTC362250.05.721825145
ATCGGAA483050.05.5511966145
GCGTCGT280300.05.4813857140-144
GATCGGA478750.05.479952145
TCGTGTA287000.05.479675145
CGTCGTG276500.05.4728427140-144
TAGATCG198500.05.4400473145
AGATCGG504450.05.4019012145
TCGGAAG491150.05.3711114145
CGTGTAG293750.05.2304145
CGGAAGA501200.05.075432145
GTCGTGT294700.05.0512385140-144
Produced by FastQC (version 0.11.5)