FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005753407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51277825
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG455450.06.5894074145
ATCGGAA435100.06.3311305145
TCGGAAG435000.06.2325974145
GATCGGA428100.06.0790534145
CGTCTGA269300.06.002819145
TAGATCG179650.05.8913164145
ACACGTC296650.05.7181854145
CGGAAGA445400.05.338391145
GCACACG410350.05.1584015145
ACGTCTG309800.05.077677145
CACGTCT343050.05.008154145
Produced by FastQC (version 0.11.5)