FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753408

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753408
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51277825
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG46750.06.5125995145
AGATCGG505600.06.0505114145
CGTCGTG274800.05.961814145
GCGTCGT278600.05.880497145
CGTGTAG293850.05.748002145
ATCGGAA479150.05.67344145
TCGGAAG486750.05.6593213145
AGCGTCG303750.05.656122145
GAGCGTC358600.05.4782987145
TCGTGTA283900.05.4387727145
GTCGTGT289850.05.3771462145
GATCGGA476050.05.3449206145
TAGATCG193300.05.1153383140-144
Produced by FastQC (version 0.11.5)