FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59226902
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG50250.015.28761145
CGTCGTG641250.06.984429145
GTCGTGT641100.06.601717145
TCGTGTA612950.06.3019066145
AGCGTCG710500.06.1506786145
GTCGCCG159000.06.0165377145
GAGCGTC786000.06.0024457145
GCGTCGT660200.05.951863140-144
GATCGGA1086400.05.7102327145
AGATCGG1124650.05.7093434145
CGCCGTA122950.05.68337445-49
TCGGAAG1051050.05.6471634145
ATCGGAA1071700.05.612736145
CGTGTAG612350.05.588499140-144
AAGAGCG957500.05.5479817145
GTGGTCG207350.05.417482145
AGAGCGT853550.05.4034376140-144
GGTCGCC187000.05.309441145
TAGATCG417200.05.2286797145
CGGAAGA1044550.05.2243896145
Produced by FastQC (version 0.11.5)