FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753428

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753428
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58124107
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG50100.014.46894145
AGCGTCG699000.07.062271145
CGTCGTG628000.06.475565145
CGCCGTA122000.06.00079145-49
CGTGTAG605650.05.996398145
GTCGTGT624450.05.8855186145
GCGTCGT646250.05.7655005145
GATCGGA1058700.05.7514963145
AGAGCGT845250.05.608762145
TCGTGTA606700.05.5939527140-144
GAGCGTC775500.05.571074145
AAGAGCG934450.05.531054145
GTCGCCG159300.05.4150896145
TCGGAAG1032600.05.391424145
TAGATCG409150.05.3859887145
GTGGTCG210450.05.3734117145
AGATCGG1097600.05.3297133145
ATCGGAA1046350.05.2720823145
CGGAAGA1024400.05.2152166145
TCGCCGT140800.05.14806845-49
Produced by FastQC (version 0.11.5)