FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753434

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753434
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59015760
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG47300.014.865534145
CGTCGTG627200.06.4144125145
AGCGTCG693150.06.327004145
GAGCGTC771200.06.2412415145
CGTGTAG605150.06.1809697145
TCGTGTA603050.06.1423917145
CGCCGTA123750.06.045255745-49
GCGTCGT647750.06.013898140-144
GTCGTGT627950.05.991178145
ATCGGAA1047450.05.771686145
AGATCGG1096600.05.625372145
TGGTCGC188400.05.425105145
AAGAGCG937700.05.3881392145
TCGCCGT137800.05.35523745-49
CGGAAGA1025150.05.3244834145
CAGATCG307800.05.3224277145
TCGGAAG1030700.05.309879145
GTGTAGG786800.05.288317145
TAGATCG407800.05.261559145
AGAGCGT838400.05.2602177140-144
Produced by FastQC (version 0.11.5)